Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890936.1_cds_XP_016445632.1_40575
CDS Infomation

[gene=LOC107770816] [db_xref=GeneID:107770816] [protein=rop guanine nucleotide exchange factor 1-like] [protein_id=XP_016445632.1] [location=complement(join(18815..19240,19654..20007,20853..21391,21483..21599,21782..22079))] [gbkey=CDS]
Sequence

ATGGGGAGTGTATCATCTGAAGAAGGTTCAGATCAGCAGAGTGAGCGGTGTGGGAGCTAC
AGTTTAAGTGCTGATGTGAGTGAGTCCGAAAGTTCTTCTAGCAGTTTCTCCTGTCGGCGC
TATGACGCTGAGGGCGCGTCCAGCTCTATGGCGTCGTCTCCACTCGCTTGTCGGAGATTC
GCCGCAAAATCGGAGTTCCCAGCCCCAATGATACCACCATTCATGTTCCCGGTCATTGGC
GGGAAAGATGTAGTGCTCTGTAATGACAAGTCCGAGAAACGCCAAGCAGATTTATCTGAA
ATTGATCTGATGAAGGAGAGATTTGCTAAGCTGTTACTTGGTGAGGACATGTCTGGAGGG
GGTAAAGGGGTTTGTACGGCACTTGCAATCTCAAACGCTATCACAAATCTATCTGCTACT
ATATTTGGGGAATTATGGAGGTTGGAACCATTGGCTGCTCAAAAGAAGGCAATGTGGTGT
AGGGAAATGGAGTGGTTGTTGTGTGTGAGTGACTCTATTGTGGAGCTTGTGCCTTCTATT
CAACAGTTTCCTGGAGGAGGCACGTATGAAGTAATGGCGACGCAACCACGTTCTGATTTA
TATCTGAACTTGCCTGCTTTGAAGAAACTTGATGCCATGTTGATTAGCATACTTGATGGA
TTTCGTGACACAGAGTTTTGGCATGTGGATCGAGGCATAGTTTTAGGTGATGGAGAAGAC
TGTGACTCCTATACTTCGGGCATTGGGTTTGGTAGGCCTTCAGTTCGGCAGGAAGAGAAG
TGGTGGCTGCCATGCCCTAAAGTTCCCCCCAAAGGGTTGTCAGAAGAAGCTAGGAAGAGA
TTGCAACAATGTAGGGATTGCACAAACCAGATATTGAAGGCAGCATTGGCGATCAACAGT
AATGTACTTGCTGAGATGGAGACTCCAAGTGCCTATGTCGAAACTTTGCCGAAGAGTGGA
AAAGCTTGTTTAGGTGATATCATCTATCGCTACATCACTGCTGACAAGTTCTCACCTGAA
TGTCTTCTTGATTGCCTGGACTTGTCATCGGAGCACCATACGCTGGAAGTGGCAAATAGA
ATTGAGGCTGCTGTGCATGTTTGGACGCTCAAGGACCAGAAGAAACATCCACATAAAAGG
AAATCTAAACGCAAATCATGGGGAGGGAAGGTCAAGGGCCTTGTTGGAGATGGTGATAAG
AATCAGTATCTGGCAGAACGAGCAGAAACACTCTTGCATAGTCTCAGGCTTCGCTTCCCT
GGTCTTCCTCAAACTTCACTTGACATGAACAAGATACAGTATAACAAGGATGTTGGGCAG
TCAATACTTGAGAGCTACTCAAGGGTCATGGAGAGCTTGGCATTTAACATAATGGCGAGA
ATTGATGATGTATTATATGTAGATGATGCAACAAAACGCTGTGCTGCCGCAGAGTCCATA
TCCCTTTTCAATAGGGGAGGTTTGGGTGGTCTTCCAGTCCAAAAGCGGATGTCACCAAGC
CCTTTTTCTATTCAGCACTCTCCTTATGCCTCTCCATTTGCTACACCAACCTTTTGCTTA
TCTCCCCTGATTGGTAGCCCAGGGAAGGCAGTTTCTCCTTCTAAGGCTGGTTCCAAGGTA
CCACCAATGGATAAACTGGAGAAAGCGATGCCAACTGATTTGGATAAATTGTGGTCATAT
GCAGGGAACCTTAGTGCAAGAAGACCTTCTAAGGATGCTCCTGAACGAGACTGA

Peptide Sequence

PEP ID

XP_016445632.1
PEP Infomation

PREDICTED: rop guanine nucleotide exchange factor 1-like [Nicotiana tabacum]
Sequence

MGSVSSEEGSDQQSERCGSYSLSADVSESESSSSSFSCRRYDAEGASSSMASSPLACRRF
AAKSEFPAPMIPPFMFPVIGGKDVVLCNDKSEKRQADLSEIDLMKERFAKLLLGEDMSGG
GKGVCTALAISNAITNLSATIFGELWRLEPLAAQKKAMWCREMEWLLCVSDSIVELVPSI
QQFPGGGTYEVMATQPRSDLYLNLPALKKLDAMLISILDGFRDTEFWHVDRGIVLGDGED
CDSYTSGIGFGRPSVRQEEKWWLPCPKVPPKGLSEEARKRLQQCRDCTNQILKAALAINS
NVLAEMETPSAYVETLPKSGKACLGDIIYRYITADKFSPECLLDCLDLSSEHHTLEVANR
IEAAVHVWTLKDQKKHPHKRKSKRKSWGGKVKGLVGDGDKNQYLAERAETLLHSLRLRFP
GLPQTSLDMNKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDATKRCAAAESI
SLFNRGGLGGLPVQKRMSPSPFSIQHSPYASPFATPTFCLSPLIGSPGKAVSPSKAGSKV
PPMDKLEKAMPTDLDKLWSYAGNLSARRPSKDAPERD

Transcript Sequence

Gene sequence data has not been registered.